Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW170_20805 | Not Available | Positive | 4633766 - 4635385 | 60714.0 |
| hypothetical protein | DW170_20810 | Not Available | Negative | 4635607 - 4636623 | 38954.8 |
| tonb-dependent receptor | DW170_20815 | Not Available | Negative | 4636673 - 4638811 | 80503.0 |
| hypothetical protein | DW170_20820 | Not Available | Negative | 4638905 - 4639231 | 12461.3 |
| phosphatase pap2 family protein | DW170_20825 | Not Available | Negative | 4639408 - 4640073 | 24853.9 |
| alkaline phosphatase family protein | DW170_20830 | Not Available | Negative | 4640097 - 4641857 | 66094.9 |
| cysteine synthase a | DW170_20835 | Not Available | Positive | 4642026 - 4642976 | 33405.3 |
| tetratricopeptide repeat protein | DW170_20840 | Not Available | Positive | 4643051 - 4643902 | 32401.2 |
| dna helicase recq | DW170_20850 | Not Available | Negative | 4644297 - 4646120 | 68841.0 |
| arac family transcriptional regulator | DW170_20855 | Not Available | Positive | 4646336 - 4646800 | 18140.7 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



