Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb family protein | DW170_20290 | Not Available | Positive | 4524377 - 4526110 | 65948.5 |
| tlpa family protein disulfide reductase | DW170_20295 | Not Available | Positive | 4526153 - 4528054 | 71278.8 |
| iron-sulfur cluster carrier protein apbc | DW170_20300 | Not Available | Negative | 4528145 - 4529251 | 39497.4 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DW170_20305 | Not Available | Negative | 4529260 - 4530018 | 29480.3 |
| mbl fold metallo-hydrolase | DW170_20310 | Not Available | Negative | 4530028 - 4530834 | 30343.5 |
| branched-chain amino acid aminotransferase | DW170_20315 | Not Available | Negative | 4530846 - 4531865 | 37856.2 |
| exodeoxyribonuclease vii small subunit | DW170_20320 | Not Available | Negative | 4531911 - 4532123 | 8164.77 |
| exodeoxyribonuclease vii large subunit | DW170_20325 | Not Available | Negative | 4532219 - 4533451 | 46197.5 |
| serine protease | DW170_20330 | Not Available | Negative | 4533455 - 4534810 | 49102.5 |
| trna 2-thiouridine(34) synthase mnma | DW170_20335 | Not Available | Negative | 4534838 - 4535926 | 41229.6 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



