Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_20130 | Not Available | Negative | 4484272 - 4485111 | 31939.0 |
| hypothetical protein | DW170_20135 | Not Available | Negative | 4485127 - 4485564 | 16659.0 |
| sensor histidine kinase | DW170_20140 | Not Available | Negative | 4485883 - 4487181 | 50346.4 |
| dna-binding response regulator | DW170_20145 | Not Available | Negative | 4487199 - 4487876 | 26107.6 |
| n-acetylglucosamine-6-phosphate deacetylase | DW170_20150 | Not Available | Positive | 4488033 - 4489184 | 41909.4 |
| hypothetical protein | DW170_20165 | Not Available | Negative | 4491660 - 4491905 | 9250.55 |
| hypothetical protein | DW170_20170 | Not Available | Negative | 4491926 - 4492408 | 18370.0 |
| rna polymerase sigma-70 factor | DW170_20175 | Not Available | Positive | 4492716 - 4493282 | 22194.8 |
| fecr family protein | DW170_20180 | Not Available | Positive | 4493356 - 4494324 | 37660.2 |
| susc/raga family tonb-linked outer membrane protein | DW170_20185 | Not Available | Positive | 4494511 - 4497951 | 128469.0 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



