Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DW170_19920 | Not Available | Negative | 4441790 - 4442872 | 42246.6 |
| polysaccharide pyruvyl transferase family protein | DW170_19925 | Not Available | Negative | 4442906 - 4444000 | 42320.6 |
| 4fe-4s dicluster domain-containing protein | DW170_19930 | Not Available | Negative | 4443997 - 4445160 | 45011.8 |
| hypothetical protein | DW170_19935 | Not Available | Negative | 4445162 - 4446199 | 40092.1 |
| lipopolysaccharide biosynthesis protein | DW170_19940 | Not Available | Negative | 4446201 - 4447745 | 57746.5 |
| upxy family transcription antiterminator | DW170_19945 | Not Available | Negative | 4447918 - 4448436 | 19545.0 |
| hypothetical protein | DW170_19950 | Not Available | Positive | 4448903 - 4449100 | 7014.84 |
| duf3987 domain-containing protein | DW170_19955 | Not Available | Positive | 4449166 - 4451472 | 85433.8 |
| duf4248 domain-containing protein | DW170_19960 | Not Available | Negative | 4451727 - 4451975 | 9803.83 |
| dna-binding protein | DW170_19965 | Not Available | Positive | 4452167 - 4452619 | 15961.9 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



