Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate dehydrogenase | DW170_19560 | Not Available | Positive | 4367994 - 4368992 | 36917.1 |
| mbl fold metallo-hydrolase | DW170_19565 | Not Available | Positive | 4369053 - 4369811 | 28427.5 |
| duf3352 domain-containing protein | DW170_19570 | Not Available | Positive | 4369904 - 4371541 | 61844.1 |
| duf3127 domain-containing protein | DW170_19575 | Not Available | Negative | 4371619 - 4371993 | 13844.3 |
| dna polymerase iii subunit beta | DW170_19580 | Not Available | Positive | 4372146 - 4373270 | 41401.8 |
| 3'-5' exonuclease | DW170_19585 | Not Available | Positive | 4373401 - 4374174 | 29239.6 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DW170_19590 | Not Available | Positive | 4374177 - 4375370 | 43104.2 |
| dna repair protein recn | DW170_19595 | Not Available | Positive | 4375374 - 4377059 | 62978.2 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DW170_19600 | Not Available | Positive | 4377120 - 4377860 | 26946.7 |
| serine protease | DW170_19605 | Not Available | Positive | 4377881 - 4379587 | 62833.0 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



