Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DW170_19410 | Not Available | Negative | 4337576 - 4340542 | 108271.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW170_19415 | Not Available | Negative | 4341120 - 4342634 | 56889.1 |
| tonb-dependent receptor | DW170_19420 | Not Available | Negative | 4342652 - 4345471 | 104406.0 |
| hypothetical protein | DW170_19425 | Not Available | Positive | 4345487 - 4345983 | 18459.1 |
| hypothetical protein | DW170_19430 | Not Available | Positive | 4346310 - 4346576 | 9884.13 |
| hypothetical protein | DW170_19435 | Not Available | Negative | 4346830 - 4347420 | 22384.0 |
| toxin-antitoxin system hicb family antitoxin | DW170_19440 | Not Available | Negative | 4347604 - 4347807 | 7327.88 |
| hypothetical protein | DW170_19445 | Not Available | Positive | 4347851 - 4348009 | 6187.66 |
| duf3791 domain-containing protein | DW170_19450 | Not Available | Positive | 4348074 - 4348382 | 11631.1 |
| duf3990 domain-containing protein | DW170_19455 | Not Available | Positive | 4348376 - 4348891 | 19577.5 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



