Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_19255 | Not Available | Negative | 4301305 - 4301490 | 6869.19 |
| dmt family transporter | DW170_19265 | Not Available | Positive | 4301738 - 4302688 | 34259.2 |
| thiamine diphosphokinase | DW170_19270 | Not Available | Negative | 4302642 - 4303265 | 23036.2 |
| nicotinamide riboside transporter pnuc | DW170_19275 | Not Available | Negative | 4303252 - 4303824 | 22425.8 |
| tonb-dependent receptor | DW170_19280 | Not Available | Negative | 4303828 - 4306047 | 84029.0 |
| mechanosensitive ion channel family protein | DW170_19285 | Not Available | Positive | 4306260 - 4307165 | 32896.1 |
| hypothetical protein | DW170_19290 | Not Available | Negative | 4307235 - 4307474 | 9268.89 |
| rna polymerase sigma-70 factor | DW170_19295 | Not Available | Positive | 4307602 - 4308189 | 23445.2 |
| duf4974 domain-containing protein | DW170_19300 | Not Available | Positive | 4308251 - 4309249 | 38077.5 |
| hypothetical protein | DW170_19305 | Not Available | Positive | 4309456 - 4311858 | 90167.5 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



