Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor protein kdpd | DW170_19105 | Not Available | Positive | 4257071 - 4258198 | 42496.1 |
| hamp domain-containing protein | DW170_19110 | Not Available | Positive | 4258227 - 4259666 | 54033.9 |
| rna polymerase sigma-70 factor | DW170_19115 | Not Available | Positive | 4259825 - 4260388 | 21988.6 |
| fecr family protein | DW170_19120 | Not Available | Positive | 4260442 - 4261452 | 38556.7 |
| susc/raga family tonb-linked outer membrane protein | DW170_19125 | Not Available | Positive | 4261570 - 4264983 | 126194.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW170_19130 | Not Available | Positive | 4265007 - 4266494 | 55725.9 |
| hypothetical protein | DW170_19135 | Not Available | Positive | 4266618 - 4269011 | 91130.1 |
| hypothetical protein | DW170_19140 | Not Available | Positive | 4269184 - 4272132 | 111742.0 |
| hypothetical protein | DW170_19145 | Not Available | Positive | 4272238 - 4272993 | 27543.4 |
| hypothetical protein | DW170_19150 | Not Available | Negative | 4273948 - 4274604 | 23989.7 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



