Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine exporter lyso family protein | DW170_01800 | Not Available | Negative | 360569 - 361189 | 22422.4 |
| duf340 domain-containing protein | DW170_01805 | Not Available | Negative | 361186 - 361464 | 10047.9 |
| aspartate carbamoyltransferase | DW170_01810 | Not Available | Positive | 361896 - 362822 | 35560.9 |
| aspartate carbamoyltransferase regulatory subunit | DW170_01815 | Not Available | Positive | 362827 - 363288 | 17364.4 |
| flavin reductase family protein | DW170_01820 | Not Available | Positive | 363374 - 363943 | 21377.8 |
| port family protein | DW170_01825 | Not Available | Positive | 363940 - 364668 | 28142.8 |
| serine hydroxymethyltransferase | DW170_01830 | Not Available | Positive | 364776 - 366056 | 46842.6 |
| hypothetical protein | DW170_01835 | Not Available | Positive | 366240 - 366950 | 26625.4 |
| formate--tetrahydrofolate ligase | DW170_01840 | Not Available | Negative | 367244 - 368911 | 60422.1 |
| sensor histidine kinase | DW170_01845 | Not Available | Positive | 369080 - 371089 | 77562.8 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



