Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_18395 | Not Available | Positive | 4091808 - 4093121 | 48514.8 |
| hypothetical protein | DW170_18400 | Not Available | Positive | 4093330 - 4094205 | 32174.0 |
| diaminopimelate epimerase | DW170_18405 | Not Available | Positive | 4094649 - 4095458 | 29300.1 |
| ll-diaminopimelate aminotransferase | DW170_18410 | Not Available | Positive | 4095511 - 4096743 | 45933.0 |
| duf308 domain-containing protein | DW170_18415 | Not Available | Negative | 4096876 - 4097442 | 20653.2 |
| rna degradosome polyphosphate kinase | DW170_18420 | Not Available | Positive | 4097613 - 4099679 | 80042.5 |
| ppx/gppa family phosphatase | DW170_18425 | Not Available | Positive | 4099676 - 4100590 | 33873.2 |
| iron-containing alcohol dehydrogenase | DW170_18430 | Not Available | Negative | 4100783 - 4101928 | 42335.1 |
| hypothetical protein | DW170_18435 | Not Available | Positive | 4102301 - 4102540 | 9174.22 |
| hypothetical protein | DW170_18440 | Not Available | Positive | 4102758 - 4102946 | 7339.81 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



