Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit b | DW170_18290 | Not Available | Positive | 4063610 - 4065643 | 77057.9 |
| hypothetical protein | DW170_18295 | Not Available | Positive | 4065758 - 4065931 | 6692.39 |
| vancomycin high temperature exclusion protein | DW170_18300 | Not Available | Positive | 4065928 - 4066566 | 23920.4 |
| hypothetical protein | DW170_18310 | Not Available | Positive | 4067203 - 4067895 | 26852.5 |
| hsp20/alpha crystallin family protein | DW170_18315 | Not Available | Positive | 4068139 - 4068567 | 16451.6 |
| response regulator | DW170_18320 | Not Available | Negative | 4068663 - 4071731 | 117278.0 |
| abc transporter permease | DW170_18325 | Not Available | Negative | 4071865 - 4072983 | 41908.5 |
| abc transporter permease | DW170_18330 | Not Available | Negative | 4072980 - 4074080 | 40865.8 |
| abc transporter atp-binding protein | DW170_18335 | Not Available | Negative | 4074084 - 4075544 | 54560.6 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW170_18340 | Not Available | Negative | 4075558 - 4076454 | 32764.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



