Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3078 domain-containing protein | DW170_18185 | Not Available | Negative | 4039455 - 4040888 | 54868.4 |
| hypothetical protein | DW170_18190 | Not Available | Negative | 4040970 - 4041230 | 9923.26 |
| ctp synthase | DW170_18195 | Not Available | Positive | 4041272 - 4042873 | 60034.1 |
| membrane protein insertase yidc | DW170_18200 | Not Available | Positive | 4042922 - 4044778 | 70859.7 |
| mate family efflux transporter | DW170_18205 | Not Available | Positive | 4044867 - 4046198 | 49889.4 |
| s9 family peptidase | DW170_18210 | Not Available | Positive | 4046272 - 4048380 | 79464.8 |
| hypothetical protein | DW170_18215 | Not Available | Negative | 4048481 - 4049476 | 38061.9 |
| pspc domain-containing protein | DW170_18220 | Not Available | Negative | 4049628 - 4050707 | 39369.6 |
| padr family transcriptional regulator | DW170_18225 | Not Available | Negative | 4050720 - 4051055 | 12846.6 |
| gnat family n-acetyltransferase | DW170_18230 | Not Available | Positive | 4051217 - 4051714 | 19242.1 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



