Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_17985 | Not Available | Negative | 4000776 - 4001015 | 8911.98 |
| hypothetical protein | DW170_17990 | Not Available | Negative | 4001502 - 4001918 | 15557.8 |
| dephospho-coa kinase | DW170_17995 | Not Available | Negative | 4001936 - 4002553 | 22897.9 |
| ybbr-like domain-containing protein | DW170_18000 | Not Available | Negative | 4002543 - 4003556 | 38164.5 |
| preprotein translocase subunit yajc | DW170_18005 | Not Available | Negative | 4003580 - 4003906 | 12009.8 |
| transcription antitermination factor nusb | DW170_18010 | Not Available | Negative | 4003953 - 4004729 | 30282.0 |
| duf3276 family protein | DW170_18015 | Not Available | Positive | 4005048 - 4005434 | 14930.5 |
| 50s ribosomal protein l25 | DW170_18020 | Not Available | Positive | 4005579 - 4006169 | 21294.2 |
| aminoacyl-trna hydrolase | DW170_18025 | Not Available | Positive | 4006276 - 4006839 | 20915.3 |
| rna-binding s4 domain-containing protein | DW170_18030 | Not Available | Positive | 4006866 - 4007291 | 16307.7 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



