Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-dependent thiol peroxidase | DW170_17935 | Not Available | Positive | 3991581 - 3992027 | 16788.2 |
| recombinase reca | DW170_17940 | Not Available | Positive | 3992038 - 3993081 | 37584.1 |
| hypothetical protein | DW170_17945 | Not Available | Negative | 3993147 - 3993428 | 10854.4 |
| rna polymerase sigma factor | DW170_17950 | Not Available | Positive | 3993513 - 3994028 | 20104.0 |
| hypothetical protein | DW170_17955 | Not Available | Positive | 3994009 - 3994536 | 20207.0 |
| duf4252 domain-containing protein | DW170_17960 | Not Available | Positive | 3994543 - 3995226 | 25987.8 |
| putative sulfate exporter family transporter | DW170_17965 | Not Available | Negative | 3995315 - 3996307 | 35618.4 |
| lysr family transcriptional regulator | DW170_17970 | Not Available | Negative | 3996387 - 3997283 | 33815.2 |
| hypothetical protein | DW170_17975 | Not Available | Negative | 3997308 - 3997889 | 22015.5 |
| atp-dependent chaperone clpb | DW170_17980 | Not Available | Positive | 3998112 - 4000700 | 97116.5 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



