Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase | DW170_17830 | Not Available | Positive | 3960704 - 3962164 | 55938.7 |
| trka family potassium uptake protein | DW170_17835 | Not Available | Negative | 3962261 - 3962947 | 25492.9 |
| potassium transporter | DW170_17840 | Not Available | Negative | 3962963 - 3964798 | 68198.4 |
| trpb-like pyridoxal phosphate-dependent enzyme | DW170_17845 | Not Available | Positive | 3964934 - 3966301 | 50272.1 |
| endonuclease | DW170_17850 | Not Available | Positive | 3966430 - 3967266 | 31486.3 |
| clc family h(+)/cl(-) exchange transporter | DW170_17855 | Not Available | Negative | 3967260 - 3968831 | 58115.2 |
| recq family atp-dependent dna helicase | DW170_17860 | Not Available | Positive | 3969294 - 3974168 | 186243.0 |
| hth domain-containing protein | DW170_17865 | Not Available | Positive | 3974247 - 3975824 | 59507.5 |
| hypothetical protein | DW170_17870 | Not Available | Positive | 3975829 - 3976518 | 26157.2 |
| hypothetical protein | DW170_17875 | Not Available | Positive | 3976584 - 3976925 | 13271.7 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



