Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | DW170_17775 | Not Available | Negative | 3945985 - 3946884 | 33227.4 |
| metallophosphatase | DW170_17780 | Not Available | Negative | 3946926 - 3947912 | 37032.1 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW170_17785 | Not Available | Negative | 3948000 - 3949523 | 57881.1 |
| susc/raga family tonb-linked outer membrane protein | DW170_17790 | Not Available | Negative | 3949535 - 3952921 | 126632.0 |
| fecr family protein | DW170_17795 | Not Available | Negative | 3953094 - 3954059 | 36802.3 |
| hypothetical protein | DW170_17800 | Not Available | Negative | 3954593 - 3954817 | 8344.85 |
| cepa family class a extended-spectrum beta-lactamase | DW170_17805 | Not Available | Positive | 3954871 - 3955773 | 34072.0 |
| arabinan endo-1,5-alpha-l-arabinosidase | DW170_17810 | Not Available | Negative | 3955957 - 3956958 | 37652.5 |
| rna polymerase sigma-70 factor | DW170_17815 | Not Available | Negative | 3957015 - 3957560 | 21861.4 |
| duf5110 domain-containing protein | DW170_17820 | Not Available | Positive | 3957695 - 3960232 | 98285.5 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



