Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | DW170_17520 | Not Available | Negative | 3894701 - 3895558 | 32346.3 |
| o-succinylbenzoic acid--coa ligase | DW170_17525 | Not Available | Negative | 3895629 - 3896723 | 40388.5 |
| o-succinylbenzoate synthase | DW170_17530 | Not Available | Negative | 3896737 - 3897756 | 38222.1 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DW170_17535 | Not Available | Negative | 3897805 - 3898629 | 30426.5 |
| hypothetical protein | DW170_17540 | Not Available | Negative | 3898651 - 3899655 | 38151.7 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | DW170_17545 | Not Available | Negative | 3899657 - 3901324 | 62661.5 |
| isochorismate synthase | DW170_17550 | Not Available | Negative | 3901345 - 3902451 | 41866.7 |
| cof-type had-iib family hydrolase | DW170_17555 | Not Available | Negative | 3902448 - 3903680 | 44916.2 |
| hypothetical protein | DW170_17560 | Not Available | Positive | 3903799 - 3903954 | 5768.74 |
| hypothetical protein | DW170_17565 | Not Available | Positive | 3904076 - 3904240 | 5839.18 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



