Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lincosamide nucleotidyltransferase lnu(an2) | DW170_17420 | Not Available | Negative | 3869746 - 3870258 | 19722.3 |
| macrolide efflux mfs transporter mef(en2) | DW170_17425 | Not Available | Negative | 3870283 - 3871488 | 44135.4 |
| Trna-ser | Not Available | Not Available | Positive | 3871813 - 3871900 | Not Available |
| formate c-acetyltransferase | DW170_17435 | Not Available | Positive | 3872155 - 3874383 | 83781.0 |
| pyruvate formate lyase-activating protein | DW170_17440 | Not Available | Positive | 3874388 - 3875113 | 27507.9 |
| porin | DW170_17445 | Not Available | Negative | 3875345 - 3876604 | 46127.1 |
| sigma-70 family rna polymerase sigma factor | DW170_17450 | Not Available | Negative | 3876659 - 3877207 | 21059.2 |
| hypothetical protein | DW170_17455 | Not Available | Positive | 3877395 - 3878147 | 28085.5 |
| hydrogen peroxide-inducible genes activator | DW170_17460 | Not Available | Negative | 3878252 - 3879178 | 35250.5 |
| dna starvation/stationary phase protection protein | DW170_17465 | Not Available | Positive | 3879320 - 3879793 | 17892.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



