Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | DW170_17035 | Not Available | Positive | 3801040 - 3801315 | 10587.1 |
| mobilization protein | DW170_17040 | Not Available | Positive | 3801373 - 3803061 | 63699.4 |
| hypothetical protein | DW170_17045 | Not Available | Negative | 3803158 - 3804789 | 64926.1 |
| hypothetical protein | DW170_17050 | Not Available | Negative | 3804829 - 3806301 | 58093.5 |
| duf3945 domain-containing protein | DW170_17055 | Not Available | Positive | 3806575 - 3807864 | 48726.8 |
| duf1896 domain-containing protein | DW170_17060 | Not Available | Positive | 3807966 - 3808412 | 16988.1 |
| dna methylase | DW170_17070 | Not Available | Positive | 3808735 - 3812697 | 151645.0 |
| hypothetical protein | DW170_17075 | Not Available | Positive | 3812779 - 3813756 | 36550.6 |
| hypothetical protein | DW170_17080 | Not Available | Negative | 3813913 - 3814242 | 12614.1 |
| dna-binding protein | DW170_17085 | Not Available | Negative | 3814239 - 3814502 | 10096.5 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



