Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein recf | DW170_16925 | Not Available | Negative | 3780619 - 3781731 | 42936.7 |
| tetratricopeptide repeat protein | DW170_16930 | Not Available | Positive | 3781892 - 3782575 | 24752.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | DW170_16935 | Not Available | Positive | 3782661 - 3783155 | 17693.2 |
| Trna-tyr | Not Available | Not Available | Positive | 3783228 - 3783313 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3783319 - 3783394 | Not Available |
| alpha-n-acetylgalactosaminidase | DW170_16950 | Not Available | Positive | 3783456 - 3784733 | 47954.8 |
| hypothetical protein | DW170_16955 | Not Available | Negative | 3784830 - 3786644 | 65991.1 |
| ragb/susd family nutrient uptake outer membrane protein | DW170_16960 | Not Available | Negative | 3787250 - 3789034 | 67778.6 |
| tonb-dependent receptor | DW170_16965 | Not Available | Negative | 3789053 - 3792043 | 110564.0 |
| trag family conjugative transposon atpase | DW170_16970 | Not Available | Negative | 3792211 - 3794055 | 71446.0 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



