Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large conductance mechanosensitive channel protein mscl | DW170_16875 | Not Available | Negative | 3772332 - 3772772 | 15665.5 |
| aldehyde dehydrogenase | DW170_16880 | Not Available | Positive | 3772912 - 3773913 | 35664.8 |
| m3 family peptidase | DW170_16885 | Not Available | Positive | 3774137 - 3776194 | 78436.2 |
| duf4847 domain-containing protein | DW170_16890 | Not Available | Positive | 3776201 - 3776710 | 19168.3 |
| cmp deaminase | DW170_16895 | Not Available | Positive | 3776722 - 3777159 | 16160.2 |
| s41 family peptidase | DW170_16900 | Not Available | Positive | 3777237 - 3778964 | 64185.9 |
| 5-formyltetrahydrofolate cyclo-ligase | DW170_16905 | Not Available | Positive | 3778894 - 3779424 | 20003.3 |
| php domain-containing protein | DW170_16910 | Not Available | Positive | 3779421 - 3780209 | 30865.5 |
| hypothetical protein | DW170_16915 | Not Available | Negative | 3780149 - 3780310 | 5954.27 |
| duf721 domain-containing protein | DW170_16920 | Not Available | Negative | 3780332 - 3780622 | 11217.8 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



