Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl synthase | DW170_16825 | Not Available | Positive | 3753073 - 3753939 | 32093.6 |
| hypothetical protein | DW170_16830 | Not Available | Positive | 3754004 - 3755122 | 41892.8 |
| sam-dependent methyltransferase | DW170_16835 | Not Available | Negative | 3755088 - 3755792 | 26058.7 |
| gliding motility lipoprotein gldb | DW170_16840 | Not Available | Negative | 3755819 - 3756832 | 39658.9 |
| enoyl-acp reductase | DW170_16845 | Not Available | Negative | 3756837 - 3757694 | 31346.4 |
| tonb-dependent receptor | DW170_16850 | Not Available | Positive | 3758612 - 3761878 | 121516.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW170_16855 | Not Available | Positive | 3761892 - 3763934 | 77703.0 |
| tonb-dependent receptor | DW170_16860 | Not Available | Positive | 3764864 - 3768133 | 121007.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW170_16865 | Not Available | Positive | 3768149 - 3770173 | 77160.3 |
| glutamine-hydrolyzing gmp synthase | DW170_16870 | Not Available | Negative | 3770778 - 3772301 | 56439.8 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



