Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyl-amp synthase | DW170_16775 | Not Available | Positive | 3744082 - 3744696 | 23031.9 |
| hypothetical protein | DW170_16780 | Not Available | Positive | 3744760 - 3745185 | 15795.7 |
| glucosamine-6-phosphate deaminase | DW170_16785 | Not Available | Negative | 3745279 - 3746091 | 29896.7 |
| fpra family a-type flavoprotein | DW170_16790 | Not Available | Negative | 3746131 - 3747330 | 45200.6 |
| tigr01212 family radical sam protein | DW170_16795 | Not Available | Negative | 3747449 - 3748384 | 35771.1 |
| hypothetical protein | DW170_16800 | Not Available | Negative | 3748444 - 3748626 | 7008.28 |
| lyttr family transcriptional regulator | DW170_16805 | Not Available | Negative | 3748718 - 3749560 | 31510.5 |
| hypothetical protein | DW170_16810 | Not Available | Negative | 3749570 - 3750298 | 27066.4 |
| hypothetical protein | DW170_16815 | Not Available | Positive | 3750335 - 3750631 | 11267.3 |
| s9 family peptidase | DW170_16820 | Not Available | Positive | 3750736 - 3752946 | 84052.5 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



