Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/galactose mfs transporter | DW170_16675 | Not Available | Positive | 3718471 - 3719631 | 41163.4 |
| bifunctional dihydroorotate dehydrogenase b nad binding subunit/nadph-dependent glutamate synthase | DW170_16680 | Not Available | Positive | 3719774 - 3722062 | 82544.2 |
| aspartate 1-decarboxylase | DW170_16685 | Not Available | Negative | 3722245 - 3722598 | 12903.6 |
| pantoate--beta-alanine ligase | DW170_16690 | Not Available | Negative | 3722621 - 3723469 | 31500.8 |
| glycogen synthase | DW170_16695 | Not Available | Positive | 3723716 - 3724540 | 31526.3 |
| duf4270 domain-containing protein | DW170_16700 | Not Available | Positive | 3724564 - 3726054 | 56232.9 |
| alpha-amylase | DW170_16705 | Not Available | Negative | 3726440 - 3727828 | 52535.7 |
| glycosyltransferase family 1 protein | DW170_16710 | Not Available | Negative | 3727841 - 3729115 | 48407.0 |
| 4-alpha-glucanotransferase | DW170_16715 | Not Available | Negative | 3729130 - 3731070 | 74842.3 |
| rhomboid family intramembrane serine protease | DW170_16720 | Not Available | Positive | 3731241 - 3731918 | 25561.6 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



