Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | DW170_16520 | Not Available | Positive | 3686975 - 3687676 | 26455.1 |
| beta-hexosaminidase | DW170_16525 | Not Available | Positive | 3687721 - 3690165 | 91498.4 |
| thioredoxin-disulfide reductase | DW170_16530 | Not Available | Negative | 3690319 - 3691266 | 34026.5 |
| hypothetical protein | DW170_16535 | Not Available | Negative | 3691322 - 3691963 | 24117.2 |
| dna translocase ftsk | DW170_16540 | Not Available | Negative | 3691988 - 3694477 | 92723.1 |
| duf5063 domain-containing protein | DW170_16545 | Not Available | Positive | 3694590 - 3695225 | 24371.6 |
| 3'-5' exonuclease domain-containing protein 2 | DW170_16550 | Not Available | Positive | 3695232 - 3695882 | 24561.6 |
| class i sam-dependent rrna methyltransferase | DW170_16555 | Not Available | Positive | 3695907 - 3697085 | 44191.7 |
| 6-bladed beta-propeller | DW170_16560 | Not Available | Negative | 3697468 - 3698625 | 44180.6 |
| mfs transporter | DW170_16570 | Not Available | Positive | 3699736 - 3700995 | 46406.4 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



