Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW170_16420 | Not Available | Negative | 3661981 - 3663501 | 57297.7 |
| susc/raga family tonb-linked outer membrane protein | DW170_16425 | Not Available | Negative | 3663515 - 3666817 | 123194.0 |
| hypothetical protein | DW170_16430 | Not Available | Negative | 3666762 - 3666971 | 8286.15 |
| fecr family protein | DW170_16435 | Not Available | Negative | 3667075 - 3668100 | 39244.8 |
| rna polymerase sigma-70 factor | DW170_16440 | Not Available | Positive | 3668205 - 3668786 | 22858.3 |
| dna-binding protein | DW170_16445 | Not Available | Positive | 3668996 - 3669424 | 16039.2 |
| two-component sensor histidine kinase | DW170_16450 | Not Available | Negative | 3669390 - 3671291 | 72121.0 |
| valine--trna ligase | DW170_16455 | Not Available | Negative | 3671410 - 3674040 | 99653.0 |
| duf3810 domain-containing protein | DW170_16460 | Not Available | Positive | 3674157 - 3675218 | 41118.0 |
| nucleoside triphosphate pyrophosphohydrolase | DW170_16465 | Not Available | Positive | 3675224 - 3676009 | 30386.1 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



