Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | DW170_16265 | Not Available | Positive | 3622112 - 3623623 | 53881.8 |
| duf4831 family protein | DW170_16270 | Not Available | Positive | 3623696 - 3624751 | 38907.9 |
| pqqd family protein | DW170_16275 | Not Available | Negative | 3624885 - 3625238 | 13717.5 |
| mfs transporter | DW170_16280 | Not Available | Negative | 3625245 - 3626633 | 51071.5 |
| preprotein translocase subunit secg | DW170_16285 | Not Available | Negative | 3626804 - 3627184 | 13299.2 |
| tetratricopeptide repeat protein | DW170_16290 | Not Available | Negative | 3627189 - 3627944 | 29531.0 |
| hypothetical protein | DW170_16295 | Not Available | Negative | 3627950 - 3628471 | 19749.3 |
| sigma-54-dependent fis family transcriptional regulator | DW170_16300 | Not Available | Negative | 3628458 - 3629684 | 45688.8 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DW170_16305 | Not Available | Negative | 3629709 - 3630806 | 39911.6 |
| duf4837 family protein | DW170_16310 | Not Available | Negative | 3630811 - 3631857 | 39869.8 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



