Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-grasp domain-containing protein | DW170_16215 | Not Available | Negative | 3612996 - 3614129 | 41939.4 |
| pseudaminic acid biosynthesis protein pseg | DW170_16220 | Not Available | Negative | 3614126 - 3615088 | 36112.3 |
| pseudaminic acid cytidylyltransferase | DW170_16225 | Not Available | Negative | 3615075 - 3615770 | 26350.6 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | DW170_16230 | Not Available | Negative | 3615767 - 3616930 | 43861.2 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | DW170_16235 | Not Available | Negative | 3616927 - 3617949 | 38012.7 |
| transcriptional regulator | DW170_16240 | Not Available | Negative | 3617971 - 3618372 | 15149.2 |
| capsular polysaccharide transcription antiterminator upcy | DW170_16245 | Not Available | Negative | 3618555 - 3619073 | 20107.3 |
| hypothetical protein | DW170_16250 | Not Available | Negative | 3619454 - 3619639 | 7250.25 |
| class i sam-dependent methyltransferase | DW170_16255 | Not Available | Negative | 3619787 - 3620422 | 23723.7 |
| hypothetical protein | DW170_16260 | Not Available | Positive | 3620728 - 3622068 | 50397.1 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



