Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | DW170_16010 | Not Available | Negative | 3571425 - 3572519 | 41657.3 |
| arac family transcriptional regulator | DW170_16015 | Not Available | Negative | 3572653 - 3573669 | 38451.9 |
| histidine kinase | DW170_16020 | Not Available | Negative | 3573708 - 3576392 | 102339.0 |
| site-specific integrase | DW170_16025 | Not Available | Positive | 3577212 - 3578504 | 50662.0 |
| hypothetical protein | DW170_16030 | Not Available | Positive | 3578507 - 3579568 | 41870.8 |
| duf3853 family protein | DW170_16035 | Not Available | Positive | 3579791 - 3580099 | 11297.9 |
| mobilization protein | DW170_16040 | Not Available | Positive | 3580111 - 3581178 | 40561.7 |
| dna primase | DW170_16045 | Not Available | Positive | 3581390 - 3582346 | 36410.1 |
| mobilization protein | DW170_16050 | Not Available | Positive | 3582557 - 3583960 | 54580.6 |
| hypothetical protein | DW170_16060 | Not Available | Positive | 3584275 - 3584598 | 12474.5 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



