Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_15850 | Not Available | Positive | 3523839 - 3524360 | 19999.2 |
| restriction endonuclease subunit s | DW170_15855 | Not Available | Negative | 3524353 - 3525417 | 40814.1 |
| cell filamentation protein fic | DW170_15860 | Not Available | Negative | 3525579 - 3526967 | 53721.8 |
| type i restriction-modification system subunit m | DW170_15865 | Not Available | Negative | 3527012 - 3528565 | 58781.6 |
| duf262 domain-containing protein | DW170_15870 | Not Available | Negative | 3528582 - 3530285 | 67206.8 |
| hypothetical protein | DW170_15875 | Not Available | Negative | 3530290 - 3531213 | 35641.6 |
| type i restriction endonuclease subunit r | DW170_15880 | Not Available | Negative | 3531216 - 3534044 | 109168.0 |
| xre family transcriptional regulator | DW170_15885 | Not Available | Negative | 3534068 - 3534349 | 10597.0 |
| hypothetical protein | DW170_15890 | Not Available | Positive | 3534940 - 3535893 | 36649.2 |
| hypothetical protein | DW170_15895 | Not Available | Positive | 3535894 - 3537555 | 63521.1 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



