Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DW170_15395 | Not Available | Negative | 3423380 - 3424324 | 35570.7 |
| phosphate starvation protein phoh | DW170_15400 | Not Available | Negative | 3424344 - 3425357 | 37694.6 |
| hypothetical protein | DW170_15405 | Not Available | Positive | 3425522 - 3426202 | 25566.9 |
| flotillin family protein | DW170_15410 | Not Available | Negative | 3426286 - 3427911 | 59306.1 |
| hypothetical protein | DW170_15415 | Not Available | Negative | 3427936 - 3428433 | 18684.3 |
| right-handed parallel beta-helix repeat-containing protein | DW170_15420 | Not Available | Positive | 3428588 - 3430375 | 67015.9 |
| duf4468 domain-containing protein | DW170_15425 | Not Available | Positive | 3430407 - 3431561 | 43387.5 |
| trna pseudouridine(38-40) synthase trua | DW170_15430 | Not Available | Positive | 3431642 - 3432400 | 29271.0 |
| dmt family transporter | DW170_15435 | Not Available | Positive | 3432432 - 3433331 | 34031.3 |
| duf3256 family protein | DW170_15440 | Not Available | Positive | 3433359 - 3434012 | 24418.2 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



