Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | DW170_14685 | Not Available | Negative | 3251677 - 3252036 | 13325.0 |
| Trna-gln | Not Available | Not Available | Positive | 3252338 - 3252411 | Not Available |
| duf349 domain-containing protein | DW170_14695 | Not Available | Negative | 3252750 - 3254600 | 71623.8 |
| magnesium transporter | DW170_14700 | Not Available | Negative | 3254719 - 3256059 | 49696.7 |
| ribosomal rna small subunit methyltransferase a | DW170_14705 | Not Available | Negative | 3256160 - 3256978 | 31177.1 |
| upf0104 family protein | DW170_14710 | Not Available | Positive | 3257028 - 3258029 | 37827.8 |
| aminoacyl-histidine dipeptidase | DW170_14715 | Not Available | Positive | 3258195 - 3259652 | 52947.6 |
| hypothetical protein | DW170_14720 | Not Available | Negative | 3260120 - 3260272 | 5822.02 |
| hypothetical protein | DW170_14725 | Not Available | Negative | 3260306 - 3261988 | 64006.4 |
| duf4249 domain-containing protein | DW170_14730 | Not Available | Negative | 3262010 - 3263161 | 43841.4 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



