Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DW170_14630 | Not Available | Negative | 3239287 - 3241530 | 85898.3 |
| lysm peptidoglycan-binding domain-containing protein | DW170_14635 | Not Available | Negative | 3241599 - 3242897 | 48994.8 |
| hypothetical protein | DW170_14640 | Not Available | Negative | 3242922 - 3243788 | 32453.2 |
| parb/repb/spo0j family partition protein | DW170_14645 | Not Available | Negative | 3243789 - 3244679 | 33671.6 |
| para family protein | DW170_14650 | Not Available | Negative | 3244688 - 3245455 | 28010.0 |
| 5'-nucleotidase sure | DW170_14660 | Not Available | Positive | 3245937 - 3246704 | 28008.6 |
| lipid-a-disaccharide synthase | DW170_14665 | Not Available | Positive | 3246701 - 3247834 | 42694.3 |
| hypothetical protein | DW170_14670 | Not Available | Positive | 3247922 - 3248665 | 27852.9 |
| phosphatidate cytidylyltransferase | DW170_14675 | Not Available | Negative | 3248779 - 3249618 | 30778.3 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | DW170_14680 | Not Available | Negative | 3249634 - 3251628 | 73712.8 |
Pathways
373 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



