Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trkh family potassium uptake protein | DW170_13945 | Not Available | Positive | 3079050 - 3080549 | 55195.9 |
| hypothetical protein | DW170_13950 | Not Available | Positive | 3080719 - 3080937 | 8284.31 |
| nitrous oxide-stimulated promoter family protein | DW170_13955 | Not Available | Negative | 3081216 - 3081512 | 11795.8 |
| dmt family transporter | DW170_13960 | Not Available | Positive | 3081598 - 3082530 | 33456.7 |
| hypothetical protein | DW170_13965 | Not Available | Positive | 3082562 - 3083776 | 48487.3 |
| hypothetical protein | DW170_13970 | Not Available | Positive | 3083910 - 3084470 | 21517.6 |
| atp-binding protein | DW170_13975 | Not Available | Positive | 3084454 - 3088119 | 143873.0 |
| hypothetical protein | DW170_13980 | Not Available | Negative | 3088125 - 3088598 | 18152.8 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | DW170_13990 | Not Available | Negative | 3088878 - 3089795 | 34841.8 |
| hypothetical protein | DW170_13995 | Not Available | Negative | 3089729 - 3089911 | 6925.23 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



