Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| port family protein | DW170_13735 | Not Available | Negative | 3026675 - 3027595 | 33246.0 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DW170_13740 | Not Available | Negative | 3027652 - 3028590 | 35315.9 |
| four helix bundle protein | DW170_13745 | Not Available | Negative | 3028627 - 3028926 | 11098.5 |
| dihydroorotase | DW170_13750 | Not Available | Negative | 3028966 - 3030345 | 51437.6 |
| polyprenol monophosphomannose synthase | DW170_13755 | Not Available | Negative | 3030349 - 3031101 | 28525.6 |
| transcription-repair coupling factor | DW170_13760 | Not Available | Positive | 3031294 - 3034671 | 126903.0 |
| ygiq family radical sam protein | DW170_13765 | Not Available | Negative | 3034696 - 3036552 | 70935.4 |
| duf456 domain-containing protein | DW170_13770 | Not Available | Negative | 3036578 - 3037054 | 17164.0 |
| hypothetical protein | DW170_13775 | Not Available | Negative | 3037059 - 3037403 | 13153.9 |
| sulfurtransferase tusa family protein | DW170_13780 | Not Available | Negative | 3037400 - 3037615 | 7952.64 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



