Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i pullulanase | DW170_13065 | Not Available | Positive | 2857909 - 2859909 | 74006.8 |
| rna polymerase sigma-70 factor | DW170_13070 | Not Available | Positive | 2860150 - 2860710 | 21928.2 |
| duf4974 domain-containing protein | DW170_13075 | Not Available | Positive | 2860800 - 2861798 | 37853.4 |
| tonb-dependent receptor | DW170_13080 | Not Available | Positive | 2861936 - 2865373 | 129213.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW170_13085 | Not Available | Positive | 2865388 - 2867253 | 71851.1 |
| beta-hexosaminidase | DW170_13090 | Not Available | Positive | 2867354 - 2868910 | 60036.9 |
| n-acetylgalactosamine-6-sulfatase | DW170_13095 | Not Available | Positive | 2868926 - 2870440 | 57049.9 |
| atp-binding cassette domain-containing protein | DW170_13100 | Not Available | Positive | 2870582 - 2872036 | 54990.4 |
| pdz domain-containing protein | DW170_13105 | Not Available | Negative | 2872177 - 2874519 | 88820.0 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | DW170_13110 | Not Available | Positive | 2874676 - 2875422 | 28804.3 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



