Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i dna topoisomerase | DW170_12460 | Not Available | Positive | 2695941 - 2698286 | 88761.3 |
| duf4842 domain-containing protein | DW170_12465 | Not Available | Positive | 2698458 - 2699441 | 36606.8 |
| arginine--trna ligase | DW170_12470 | Not Available | Negative | 2699627 - 2701420 | 66761.2 |
| hu family dna-binding protein | DW170_12475 | Not Available | Negative | 2701508 - 2701780 | 9417.5 |
| rhomboid family intramembrane serine protease | DW170_12480 | Not Available | Positive | 2702028 - 2702702 | 25496.5 |
| rhomboid family intramembrane serine protease | DW170_12485 | Not Available | Positive | 2702683 - 2703582 | 33859.6 |
| endonuclease | DW170_12490 | Not Available | Positive | 2703586 - 2704683 | 41082.9 |
| hypothetical protein | DW170_12495 | Not Available | Positive | 2704848 - 2705315 | 17635.2 |
| protein translocase subunit secdf | DW170_12500 | Not Available | Positive | 2705495 - 2708518 | 110102.0 |
| hu family dna-binding protein | DW170_12505 | Not Available | Negative | 2708819 - 2709109 | 10684.2 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



