Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DW170_12155 | Not Available | Negative | 2610366 - 2610827 | 16697.9 |
| peptidase m24 family protein | DW170_12160 | Not Available | Negative | 2611409 - 2612782 | 51347.6 |
| rna polymerase sigma-54 factor | DW170_12165 | Not Available | Positive | 2613047 - 2614525 | 56389.4 |
| hypothetical protein | DW170_12170 | Not Available | Positive | 2614553 - 2615233 | 25736.1 |
| glycine cleavage system protein h | DW170_12175 | Not Available | Positive | 2615264 - 2615644 | 13912.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DW170_12180 | Not Available | Positive | 2615836 - 2616342 | 17883.2 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) | DW170_12185 | Not Available | Positive | 2616347 - 2618227 | 69115.7 |
| phospholipase | DW170_12190 | Not Available | Negative | 2618420 - 2619193 | 29184.2 |
| 1,4-beta-xylanase | DW170_12195 | Not Available | Negative | 2619206 - 2620927 | 65318.8 |
| beta-glucosidase | DW170_12200 | Not Available | Negative | 2620949 - 2622241 | 49134.1 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



