Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrb/acrd/acrf family protein | DW170_11005 | Not Available | Negative | 2387142 - 2390300 | 115543.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW170_11010 | Not Available | Negative | 2390401 - 2391417 | 37174.6 |
| tolc family protein | DW170_11015 | Not Available | Negative | 2391446 - 2392798 | 50429.7 |
| tetr/acrr family transcriptional regulator | DW170_11020 | Not Available | Negative | 2392849 - 2393493 | 25086.2 |
| histidine ammonia-lyase | DW170_11025 | Not Available | Negative | 2393804 - 2395300 | 55315.1 |
| methenyltetrahydrofolate cyclohydrolase | DW170_11030 | Not Available | Negative | 2395297 - 2395926 | 22777.5 |
| imidazolonepropionase | DW170_11035 | Not Available | Negative | 2395961 - 2397214 | 45414.8 |
| glutamate formimidoyltransferase | DW170_11040 | Not Available | Negative | 2397221 - 2398123 | 33582.8 |
| urocanate hydratase | DW170_11045 | Not Available | Negative | 2398192 - 2400177 | 73845.1 |
| hypothetical protein | DW170_11050 | Not Available | Negative | 2400376 - 2401008 | 23337.4 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



