Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | DW170_07305 | Not Available | Negative | 1598567 - 1600471 | 72831.6 |
| aconitate hydratase | DW170_07310 | Not Available | Positive | 1600730 - 1602973 | 81924.6 |
| nadp-dependent isocitrate dehydrogenase | DW170_07315 | Not Available | Positive | 1603136 - 1604326 | 43584.5 |
| citrate/2-methylcitrate synthase | DW170_07320 | Not Available | Positive | 1604339 - 1605682 | 50970.4 |
| duf1295 domain-containing protein | DW170_07325 | Not Available | Positive | 1605888 - 1606649 | 29760.9 |
| nadh:flavin oxidoreductase | DW170_07330 | Not Available | Positive | 1606664 - 1607896 | 45658.0 |
| sdr family nad(p)-dependent oxidoreductase | DW170_07335 | Not Available | Positive | 1607893 - 1608765 | 32572.7 |
| 6-phosphofructokinase | DW170_07340 | Not Available | Negative | 1608822 - 1609802 | 35251.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DW170_07345 | Not Available | Negative | 1609876 - 1610748 | 32870.6 |
| cytidylate kinase | DW170_07350 | Not Available | Negative | 1610861 - 1611550 | 25650.7 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



