Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dna ligase liga | DW170_00510 | Not Available | Negative | 115540 - 117537 | 75331.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DW170_00515 | Not Available | Positive | 117614 - 118291 | 25621.8 |
| hypothetical protein | DW170_00520 | Not Available | Negative | 118293 - 118466 | 6712.27 |
| dihydroorotate dehydrogenase | DW170_00525 | Not Available | Negative | 118509 - 119420 | 32319.5 |
| dihydroorotate dehydrogenase electron transfer subunit | DW170_00530 | Not Available | Negative | 119408 - 120184 | 28592.9 |
| xre family transcriptional regulator | DW170_00535 | Not Available | Negative | 120257 - 120712 | 17424.7 |
| hypothetical protein | DW170_00540 | Not Available | Positive | 121172 - 121324 | 5930.39 |
| dna polymerase iii subunit delta | DW170_00545 | Not Available | Negative | 121917 - 122936 | 38600.0 |
| amp nucleosidase | DW170_00550 | Not Available | Negative | 122955 - 123731 | 29011.1 |
| hypothetical protein | DW170_00555 | Not Available | Positive | 123796 - 124245 | 17474.2 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



