Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine--trna ligase | DW170_05920 | Not Available | Negative | 1278994 - 1280286 | 48206.6 |
| tatd family deoxyribonuclease | DW170_05925 | Not Available | Negative | 1280354 - 1280989 | 24660.3 |
| membrane protein insertion efficiency factor yidd | DW170_05930 | Not Available | Negative | 1280996 - 1281217 | 8361.48 |
| ribonuclease p protein component | DW170_05935 | Not Available | Negative | 1281214 - 1281594 | 14638.3 |
| uroporphyrinogen-iii synthase | DW170_05940 | Not Available | Negative | 1281685 - 1282437 | 28681.6 |
| duf4271 domain-containing protein | DW170_05945 | Not Available | Negative | 1282442 - 1283272 | 31365.2 |
| tigr00730 family rossman fold protein | DW170_05950 | Not Available | Negative | 1283269 - 1283865 | 22035.8 |
| methionine adenosyltransferase | DW170_05955 | Not Available | Negative | 1283997 - 1285289 | 47370.5 |
| hypothetical protein | DW170_05960 | Not Available | Positive | 1285498 - 1285692 | 7387.44 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DW170_05965 | Not Available | Negative | 1285672 - 1286133 | 17208.0 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



