Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | DCMOUH0042B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain DCMOUH0042B chromosome, complete
Gene Summary
Adenine Count
1453684 bp
Thymine Count
1458792 bp
Guanine Count
1112819 bp
Cytosine Count
1115962 bp
Genome Length
5141257 bp
Protein-coding Genes
4090 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle-docking protein ftsy | HR50_RS16455 | Not Available | Negative | 3746298 - 3747257 | 34602.7 |
| duf4295 domain-containing protein | HR50_RS16460 | Not Available | Negative | 3747407 - 3747565 | 5921.26 |
| 50s ribosomal protein l33 | HR50_RS16465 | Not Available | Negative | 3747585 - 3747773 | 7211.91 |
| 50s ribosomal protein l28 | HR50_RS16470 | Not Available | Negative | 3747800 - 3748060 | 9701.95 |
| cina family nicotinamide mononucleotide deamidase-related protein | HR50_RS16475 | Not Available | Negative | 3748182 - 3749414 | 44582.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | HR50_RS16480 | Not Available | Negative | 3749422 - 3750441 | 36931.2 |
| translocation/assembly module tamb domain-containing protein | HR50_RS16485 | Not Available | Positive | 3750474 - 3755078 | 173534.0 |
| yccf domain-containing protein | HR50_RS16490 | Not Available | Negative | 3755174 - 3755554 | 13762.7 |
| proline--trna ligase | HR50_RS16495 | Not Available | Negative | 3755644 - 3757137 | 56957.1 |
| tigr02757 family protein | HR50_RS16505 | Not Available | Negative | 3757432 - 3758166 | 28232.8 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



