Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | DCMOUH0042B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain DCMOUH0042B chromosome, complete
Gene Summary
Adenine Count
1453684 bp
Thymine Count
1458792 bp
Guanine Count
1112819 bp
Cytosine Count
1115962 bp
Genome Length
5141257 bp
Protein-coding Genes
4090 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein ccsa | HR50_RS15235 | Not Available | Negative | 3508308 - 3509093 | 30349.8 |
| cytochrome c biogenesis protein resb | HR50_RS15240 | Not Available | Negative | 3509077 - 3509964 | 33468.5 |
| s41 family peptidase | HR50_RS22855 | Not Available | Positive | 3510224 - 3511489 | 48022.5 |
| duf2776 domain-containing protein | HR50_RS15260 | Not Available | Negative | 3511623 - 3512672 | 37254.6 |
| isoleucine--trna ligase | HR50_RS15265 | Not Available | Positive | 3512897 - 3516322 | 130118.0 |
| trar/dksa family transcriptional regulator | HR50_RS15270 | Not Available | Positive | 3516357 - 3516737 | 14228.0 |
| lipoprotein signal peptidase | HR50_RS15275 | Not Available | Positive | 3516855 - 3517487 | 24198.9 |
| duf4296 domain-containing protein | HR50_RS15280 | Not Available | Positive | 3517498 - 3518544 | 40460.7 |
| hypothetical protein | HR50_RS23255 | Not Available | Positive | 3518553 - 3518882 | 12826.5 |
| trmh family rna methyltransferase | HR50_RS15290 | Not Available | Negative | 3518836 - 3519597 | 28241.2 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



