Rodentibacter pneumotropicus str. Ac84

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus str. Ac84 is characterized as a rod-shaped bacterium with a single replicon in its genome. This strain is cataloged under the genome accession QXNI00000000.1, indicating its unique genomic identity within the broader framework of microbial diversity. The rod shape of Rodentibacter pneumotropicus str. Ac84 suggests a potential adaptability to various environmental niches, often observed in rod-shaped bacteria, which can facilitate motility and nutrient acquisition. The presence of a single replicon is indicative of a streamlined genomic structure, possibly reflecting efficient replication and resource utilization strategies. Such genomic traits may contribute to the organism's survival and functional capabilities in specific ecological contexts, although the exact ecological role of this strain remains undefined based on the available data. Understanding the specific traits of Rodentibacter pneumotropicus str. Ac84 can provide insights into the evolutionary adaptations of bacteria within rodent-associated habitats, where interactions with host organisms and microbial communities may play significant roles in health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
StrainAc84

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain Ac84 contig_115, whole genome

Gene Summary

Adenine Count

731786 bp

Thymine Count

731639 bp

Guanine Count

490372 bp

Cytosine Count

481329 bp

Genome Length

2435126 bp

Protein-coding Genes

2167 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinD3M78_06720Not AvailableNegative1323167 - 132369419686.4
hlyc/corc family transporterD3M78_06725Not AvailableNegative1323771 - 132506348162.0
duf1523 family proteinD3M78_06730Not AvailableNegative1325284 - 132580820420.4
ychf/tatd family dna exonucleaseD3M78_06735Not AvailableNegative1325837 - 132661929546.3
dna polymerase iii subunit delta'D3M78_06740Not AvailableNegative1326678 - 132766137305.1
dtmp kinaseD3M78_06745Not AvailableNegative1327658 - 132829023755.7
endolytic transglycosylase mltgD3M78_06750Not AvailableNegative1328292 - 132933839654.8
peptidylprolyl isomeraseD3M78_06755Not AvailableNegative1329405 - 133033734173.8
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrrD3M78_06760Not AvailableNegative1330412 - 133095120495.8
f0f1 atp synthase subunit epsilonD3M78_06765Not AvailableNegative1331076 - 133150415613.0

Displaying genes 1381 – 1390 of 2354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total