Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein ccmb | D3M83_04645 | Not Available | Positive | 957107 - 957772 | 23885.8 |
| heme abc transporter permease | D3M83_04650 | Not Available | Positive | 957830 - 958573 | 27865.9 |
| heme exporter protein ccmd | D3M83_04655 | Not Available | Positive | 958602 - 958808 | 7934.58 |
| cytochrome c maturation protein ccme | D3M83_04660 | Not Available | Positive | 958805 - 959329 | 19336.4 |
| heme lyase ccmf/nrfe family subunit | D3M83_04665 | Not Available | Positive | 959326 - 961272 | 72457.8 |
| dsbe family thiol:disulfide interchange protein | D3M83_04670 | Not Available | Positive | 961403 - 961951 | 20566.1 |
| cytochrome c-type biogenesis protein ccmh | D3M83_04675 | Not Available | Positive | 961948 - 962412 | 17369.0 |
| c-type cytochrome biogenesis protein ccmi | D3M83_04680 | Not Available | Positive | 962413 - 963330 | 35195.4 |
| adhesin | D3M83_04690 | Not Available | Negative | 963744 - 971136 | 254260.0 |
| xre family transcriptional regulator | D3M83_04695 | Not Available | Positive | 971989 - 972363 | 14523.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
