Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | D3M83_04495 | Not Available | Negative | 929274 - 930356 | 40830.0 |
| elongation factor p hydroxylase | D3M83_04500 | Not Available | Negative | 930534 - 931070 | 20678.3 |
| dna polymerase iv | D3M83_04505 | Not Available | Negative | 931112 - 932179 | 40249.2 |
| hypothetical protein | D3M83_04510 | Not Available | Negative | 932354 - 932845 | 18496.4 |
| Tmrna,resume consensus sequence (at 85): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 932953 - 933317 | Not Available |
| duf4102 domain-containing protein | D3M83_04520 | Not Available | Positive | 933668 - 934918 | 48075.0 |
| 50s ribosomal protein l34 | D3M83_04525 | Not Available | Positive | 935221 - 935355 | 5018.28 |
| ribonuclease p protein component | D3M83_04530 | Not Available | Positive | 935368 - 935727 | 14128.4 |
| membrane protein insertion efficiency factor yidd | D3M83_04535 | Not Available | Positive | 935691 - 935951 | 9558.95 |
| membrane protein insertase yidc | D3M83_04540 | Not Available | Positive | 935951 - 937570 | 60959.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
