Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide abc transporter permease oppb | D3M83_03175 | Not Available | Negative | 637234 - 638154 | 33822.6 |
| oligopeptide abc transporter substrate-binding protein oppa | D3M83_03180 | Not Available | Negative | 638269 - 639906 | 61321.2 |
| tolc family protein | D3M83_03185 | Not Available | Positive | 640209 - 641477 | 47945.0 |
| type i secretion system permease/atpase | D3M83_03190 | Not Available | Positive | 641497 - 643692 | 81662.5 |
| hlyd family type i secretion periplasmic adaptor subunit | D3M83_03195 | Not Available | Positive | 643692 - 644909 | 45105.4 |
| duf1440 domain-containing protein | D3M83_03200 | Not Available | Negative | 644998 - 645621 | 23324.4 |
| transaldolase | D3M83_03205 | Not Available | Negative | 645979 - 646932 | 34959.9 |
| cell division protein ftsq | D3M83_03210 | Not Available | Negative | 647273 - 648682 | 52286.2 |
| 1-acylglycerol-3-phosphate o-acyltransferase | D3M83_03215 | Not Available | Negative | 648675 - 649421 | 28181.6 |
| udp-2,3-diacylglucosamine diphosphatase | D3M83_03220 | Not Available | Positive | 649508 - 650218 | 27293.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
