Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | D3M83_03125 | Not Available | Positive | 624933 - 628412 | 129020.0 |
| peptide deformylase | D3M83_03130 | Not Available | Positive | 628506 - 629015 | 19047.3 |
| methionyl-trna formyltransferase | D3M83_03135 | Not Available | Positive | 629198 - 630154 | 34872.0 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | D3M83_03140 | Not Available | Positive | 630154 - 631536 | 51662.7 |
| glycosyltransferase family 2 protein | D3M83_03145 | Not Available | Positive | 631554 - 632360 | 29672.7 |
| trk system potassium transporter trka | D3M83_03150 | Not Available | Positive | 632357 - 633733 | 50132.6 |
| large-conductance mechanosensitive channel protein mscl | D3M83_03155 | Not Available | Positive | 633802 - 634191 | 14049.7 |
| abc transporter atp-binding protein | D3M83_03160 | Not Available | Negative | 634304 - 635293 | 36693.1 |
| abc transporter atp-binding protein | D3M83_03165 | Not Available | Negative | 635290 - 636291 | 36887.1 |
| oligopeptide abc transporter permease oppc | D3M83_03170 | Not Available | Negative | 636301 - 637224 | 34115.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
