Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter permease | D3M83_03015 | Not Available | Positive | 598472 - 599443 | 34093.9 |
| ribose abc transporter substrate-binding protein rbsb | D3M83_03025 | Not Available | Positive | 599547 - 600413 | 29931.8 |
| ribokinase | D3M83_03030 | Not Available | Positive | 600498 - 601418 | 32089.3 |
| laci family dna-binding transcriptional regulator | D3M83_03035 | Not Available | Positive | 601446 - 602462 | 37630.8 |
| dicarboxylate transporter/tellurite-resistance protein teha | D3M83_03040 | Not Available | Negative | 602834 - 603778 | 35581.3 |
| dna-directed rna polymerase subunit beta' | D3M83_03045 | Not Available | Negative | 603955 - 608223 | 157972.0 |
| dna-directed rna polymerase subunit beta | D3M83_03050 | Not Available | Negative | 608344 - 612372 | 149731.0 |
| 50s ribosomal protein l7/l12 | D3M83_03055 | Not Available | Negative | 612675 - 613046 | 12486.0 |
| 50s ribosomal protein l10 | D3M83_03060 | Not Available | Negative | 613101 - 613592 | 17631.3 |
| rida family protein | D3M83_03065 | Not Available | Negative | 613880 - 614269 | 13938.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
